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Viari, Alain
 
     
Repseek, a tool to retrieve approximate repeats from large DNA sequences.
  G. Achaz and F. Boyer and E. P. C. Rocha and A. Viari and E. Coissac  
  Bioinformatics, 23(1):119-21, 2007.  
 
(PDF; 83.3 ko)
 
 
Genepi: a blackboard framework for genome annotation
  S. Descorps-Declère, D. Ziébelin, F. Rechenmann, A. Viari  
  BMC Bioinformatics 2006, 7:450 (12 October 2006)  
 
Reconstruction of switching thresholds in piecewise-affine models of genetic regulatory networks
  S. Drulhe, G. Ferrari-Trecate, H. de Jong, A. Viari  
  Hybrid Systems: Computation and Control: 9th International Workshop, HSCC 2006, Santa Barbara, CA, USA, March 29-31, 2006. Proceedings. Editors: João Hespanha, Ashish Tiwari. Volume 3927, p. 184 - 199.  
 
Syntons, metabolons and interactons: an exact graph-theoretical approach for exploring neighbourhood between genomic and functional data
  F. Boyer, A. Morgat, L. Labarre, J. Pothier, A. Viari  
  Bioinformatics, vol. 21, no. 23, December 1, 2005, pages 4209-4214  
 
Outils bioinformatiques pour la protéomique à haut débit - Identification automatique de protéines par MS/MS
  E. Reguer, E. Mouton, E. Nugues, R. Cahuzac, T. Vermat, M. Ferro, J. Garin, A. Viari  
  Spectra Analysis, vol. 32, n°233, pp. 25-28, septembre-octobre 2003  
 
A software pipeline dedicated to automatic MS/MS data analysis
  E. Reguer, E. Nugues, R. Cahuzac, M. Ferro, T. Vermat, E. Mouton, J. Garin  
  ECCB 2003 (European Conference on Computational Biology), Paris, September 27-30th , 2003 (short paper)  
 
Download this ECCB short paper (PDF; 437.4 ko)
 
 
Ab initio reconstruction of metabolic pathways
  F. Boyer, A. Viari  
  Bioinformatics, 2003, 19(suppl. 2), ECCB 2003 proceedings (Paris, France, September 27-30, 2003), ii26-ii34  
 
Integration of data and methods for genome analysis
  P. Durand, C. Médigue, A. Morgat, Y. Vandenbrouck, A. Viari, F. Rechenmann  
  Current Opinion in Drug Discovery and Development, 2003, Vol. 6, No. 3, pp. 346-352  
 
  GenoLink: an exploratory software for functional annotation of genomes
  P. Durand, L. Labarre, A. Meil, J.-L. Divol, V. Schächter, C. Médigue, C. Bruley, Y. Vandenbrouck, A. Viari, F. Rechenmann, J. Wojcik  
  JOBIM, June 10-12, 2002, Saint-Malo (France)  
 
Methods in proteomics, limits and technological developments. The example of proteins from plant membranes
  J. Garin, M. Ferro, N. Rolland, H. Rivière-Rolland, A. Viari, J.Joyard  
  C.R. Acad.Agric.Fr., 2001, 87, n°6, pp. 9-20  
 
 
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See also
Batt, Grégory
Boyer, Frédéric
Bronner, Gisèle
Calteau, Alexandra
Coissac, Eric
Daubin, Vincent
De Jong, Hidde
Declere, Stéphane
Drulhe, Samuel
Dufayard, Jean-François
Duret, Laurent
Gautier, Christian
Gouy, Manolo
Gueguen, Laurent
Hernandez, Céline
Lobry, Jean
Marais, Gabriel
Meunier, Julien
Morgat, Anne
Mouchiroud, Dominique
 
Nugues, Estelle
Page, Michel
Penel, Simon
Perrière, Guy
Piganeau, Gwenaele
Pisanti, Nadia
Ponger, Loïc
Rechenmann, François
Réguer, Erwan
Rivière-Rolland, Hélène
Rizzon, Carène
Ropers, Delphine
Sagot, Marie-France
Semon, Marie
Silvestre, Timothée
Spataro, Bruno
Tannier, Eric
Viari, Alain
Ziébelin, Danielle
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