The Helix research group
Research themes
Work in progress and results
Publications
Software and databases
News from Helix
Publications > Publications by author
Home page
Site map Mail to Helix
Ropers, Delphine
 
     
Symbolic Reachability Analysis of Genetic Regulatory Networks using Qualitative Abstraction
  G. Batt, H. de Jong, J. Geiselmann, M. Page, D. Ropers, D. Schneider  
  INRIA RR-5362, 2004  
 
Mod�lisation, analyse et simulation de r�seaux de r�gulation g�nique
  H. de Jong, D. Ropers, C. Chaouiya, D. Thieffry  
  Biofutur, February 2005, n� 252, pp. 36-40  
 
Qualitative Simulation of the Nutritional Stress Response in Escherichia coli
  D. Ropers, H. de Jong, M. Page, D. Schneider, J. Geiselmann  
  INRIA RR-5412  
 
Differential effects of the SR proteins 9G8, SC35, ASF/SF2 and SRp40 on the utilization of the A1 to A5 splicing sites of HIV-1 RNA
  D. Ropers, L. Ayadi, R. Gattoni, S. Jacquenet, L. Damier, C. Branlant, J. St�venin  
  Journal of Biological Chemistry, 279(29):29963-29973.  
 
Conserved stem-loop structures in the HIV-1 RNA region containing the A3 3' splice site and its cis-regulatory element: possible involvement in RNA splicing
  S. Jacquenet, D. Ropers, P. Bilodeau, L. Damier, A. Mougin, M. Stoltzfus, C. Branlant  
  Nucleic Acids Research, 29(2):464--478, 2001  
 
A Multi-Site Constraint Programming Model of Alternative Splicing Regulation
  D. Eveillard, D.Ropers, H. de Jong, C. Branlant, A. Bockmayr  
  INRIA RR-4830  
 
(PDF; 336.7 ko)
 
 
KOALAB: A new method for regulatory motif search. Illustration on alternative splicing regulation in HIV-1
  Damien Eveillard, Abdelhalim Larhlimi, Delphine Ropers, St�phanie Billaut, Sandrine Peyrefitte  
  Proceedings of the Journ�es Ouvertes Biologie Informatique Math�matiques, JOBIM 2004, Montreal, Canada  
 
(PDF; 357.8 ko)
 
 
A multi-scale constraint programming model of alternative splicing regulation
  D. Eveillard, D. Ropers, H. de Jong, C. Branlant, A. Bockmayr  
  Theoretical Computer Science, 325(1):3-24, 2004.  
 
Multiscale modeling of alternative splicing regulation
  D. Eveillard, D. Ropers, H. de Jong, C. Branlant, A. Bockmayr  
  C. Priami (ed.), Computational Methods in Systems Biology, CMSB-03, Lecture Notes in Computer Science 2602, Springer-Verlag, Berlin, 75-87, 2003  
 
(PDF; 218.3 ko)
 
 
 
[1-10] [11-19]
See also
Batt, Gr�gory
Boyer, Fr�d�ric
Bronner, Gis�le
Calteau, Alexandra
Coissac, Eric
Daubin, Vincent
De Jong, Hidde
Declere, St�phane
Drulhe, Samuel
Dufayard, Jean-Fran�ois
Duret, Laurent
Gautier, Christian
Gouy, Manolo
Gueguen, Laurent
Hernandez, C�line
Lobry, Jean
Marais, Gabriel
Meunier, Julien
Morgat, Anne
Mouchiroud, Dominique
 
Nugues, Estelle
Page, Michel
Penel, Simon
Perri�re, Guy
Piganeau, Gwenaele
Pisanti, Nadia
Ponger, Lo�c
Rechenmann, Fran�ois
R�guer, Erwan
Rivi�re-Rolland, H�l�ne
Rizzon, Car�ne
Ropers, Delphine
Sagot, Marie-France
Semon, Marie
Silvestre, Timoth�e
Spataro, Bruno
Tannier, Eric
Viari, Alain
Zi�belin, Danielle
    Top of page   Home page